STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101160780Amine oxidase. (538 aa)    
Predicted Functional Partners:
aspa
Aspartoacylase.
    
 0.921
maob
Amine oxidase.
  
 
 
0.910
TYR
Tyrosinase.
    
 0.909
LOC101161073
Amine oxidase.
  
  
0.909
LOC101175668
Amine oxidase.
  
 
 
0.909
tyr
Tyrosinase; This is a copper-containing oxidase that functions in the formation of pigments such as melanins and other polyphenolic compounds.
    
 0.909
LOC101163441
Amine oxidase.
  
  
0.908
LOC101171229
Amine oxidase.
  
  
0.908
LOC105356325
Amine oxidase.
  
  
0.908
asns
Asparagine synthetase [glutamine-hydrolyzing].
    
  0.906
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.