STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acp1LMWPc domain-containing protein. (158 aa)    
Predicted Functional Partners:
Flad1
MoCF_biosynth domain-containing protein.
    
 0.965
oca2
CitMHS domain-containing protein.
  
 
 0.952
get3
ATPase get3; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. S [...]
    
 0.951
ctnnb1
Catenin (cadherin-associated protein), beta 1.
  
 0.947
LOC101171502
Uncharacterized protein.
  
 0.936
acp2
Acid phosphatase 2, lysosomal; Belongs to the histidine acid phosphatase family.
     
 0.926
rfk
Riboflavin kinase.
    
 0.908
tpk1
Thiamine pyrophosphokinase; Belongs to the thiamine pyrophosphokinase family.
    
  0.903
LOC101171013
Uncharacterized protein.
   
 
  0.901
LOC101155077
Ectonucleotide pyrophosphatase/phosphodiesterase 1.
   
 
  0.901
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.