STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rassf3Ras association domain family member 3. (411 aa)    
Predicted Functional Partners:
LOC101175466
Uncharacterized protein.
    
 0.597
LOC101155570
Serine/threonine kinase 3 (STE20 homolog, yeast).
    
 0.597
ccdc181
Coiled-coil domain containing 181.
      
 0.559
rbm28
RNA binding motif protein 28.
      
 0.559
tbc1d30
TBC1 domain family, member 30.
      
 0.559
tanc1
Tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1b.
      
 0.559
riok3
Serine/threonine-protein kinase RIO3; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family.
      
 0.558
lemd3
LEM domain containing 3.
      
 0.471
sav1
Salvador family WW domain containing protein 1.
    
 
 0.464
mtx2
Metaxin 2.
      
 0.445
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.