STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101174943Discs, large homolog 5a (Drosophila); Belongs to the MAGUK family. (2042 aa)    
Predicted Functional Partners:
LOC101172563
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.791
cask
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.791
efcab7
EF-hand calcium binding domain 7.
    
 0.665
LOC101169874
Glutamate receptor, ionotropic, N-methyl D-aspartate 1a.
   
 0.624
LOC101175170
Uncharacterized protein.
   
 0.624
LOC101167744
Uncharacterized protein.
   
 0.573
LOC101172375
Uncharacterized protein.
   
 0.573
ENSORLP00000035838
FERM_f0 domain-containing protein.
   
 0.573
shank3
SH3 and multiple ankyrin repeat domains 3a.
   
 0.573
LOC101165307
SH3 and multiple ankyrin repeat domains 1.
   
 0.573
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.