STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101165037Muscleblind-like splicing regulator 2. (425 aa)    
Predicted Functional Partners:
sim2
Uncharacterized protein.
      
 0.587
ARNTL2
Aryl hydrocarbon receptor nuclear translocator like 2.
      
 0.575
LOC101174183
Aryl hydrocarbon receptor nuclear translocator-like 2.
      
 0.575
sim1
SIM bHLH transcription factor 1.
      
 0.561
Npas1
Neuronal PAS domain protein 1.
      
 0.519
LOC101172927
RAR-related orphan receptor C.
      
 0.515
LOC101172430
Neuronal PAS domain protein 2.
      
 0.504
rora
RAR-related orphan receptor A, paralog a.
      
 0.451
LOC101173389
Cryptochrome circadian regulator 2.
      
 0.438
polr3b
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
  
 0.418
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.