STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101157195Neurotensin. (214 aa)    
Predicted Functional Partners:
ntsr1
Neurotensin receptor 1 (high affinity); Belongs to the G-protein coupled receptor 1 family.
    
 0.998
LOC105355796
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
    
 0.963
LOC101169531
Sortilin.
    
 
 0.922
LOC101158853
Sortilin.
    
 
 0.922
LOC101157659
Sortilin.
    
 
 0.881
thop1
Thimet oligopeptidase 1.
    
 0.877
nln
Neurolysin (metallopeptidase M3 family).
    
 0.877
mipep
Mitochondrial intermediate peptidase.
    
 0.825
tac1
Uncharacterized protein.
   
 
 0.821
nmbr
Neuromedin B receptor; Belongs to the G-protein coupled receptor 1 family.
    
 0.818
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.