Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC101156111 | LOC101175353 | ENSORLP00000012560 | ENSORLP00000010004 | T-box transcription factor 2a. | SIX homeobox 7. | 0.548 |
LOC101156111 | vax2 | ENSORLP00000012560 | ENSORLP00000036208 | T-box transcription factor 2a. | Ventral anterior homeobox 2. | 0.417 |
LOC101161908 | LOC101171064 | ENSORLP00000034931 | ENSORLP00000038952 | T-box transcription factor 5a. | Growth differentiation factor 6a. | 0.462 |
LOC101161908 | vax2 | ENSORLP00000034931 | ENSORLP00000036208 | T-box transcription factor 5a. | Ventral anterior homeobox 2. | 0.514 |
LOC101163759 | vax2 | ENSORLP00000002541 | ENSORLP00000036208 | Cytochrome P450, family 26, subfamily C, polypeptide 1; Belongs to the cytochrome P450 family. | Ventral anterior homeobox 2. | 0.502 |
LOC101171064 | LOC101161908 | ENSORLP00000038952 | ENSORLP00000034931 | Growth differentiation factor 6a. | T-box transcription factor 5a. | 0.462 |
LOC101171064 | vax2 | ENSORLP00000038952 | ENSORLP00000036208 | Growth differentiation factor 6a. | Ventral anterior homeobox 2. | 0.400 |
LOC101175353 | LOC101156111 | ENSORLP00000010004 | ENSORLP00000012560 | SIX homeobox 7. | T-box transcription factor 2a. | 0.548 |
LOC101175353 | vax2 | ENSORLP00000010004 | ENSORLP00000036208 | SIX homeobox 7. | Ventral anterior homeobox 2. | 0.517 |
atp6v1ba | vax2 | ENSORLP00000034915 | ENSORLP00000036208 | Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family. | Ventral anterior homeobox 2. | 0.543 |
pax2 | vax2 | ENSORLP00000038259 | ENSORLP00000036208 | Paired box 2b. | Ventral anterior homeobox 2. | 0.403 |
vax2 | LOC101156111 | ENSORLP00000036208 | ENSORLP00000012560 | Ventral anterior homeobox 2. | T-box transcription factor 2a. | 0.417 |
vax2 | LOC101161908 | ENSORLP00000036208 | ENSORLP00000034931 | Ventral anterior homeobox 2. | T-box transcription factor 5a. | 0.514 |
vax2 | LOC101163759 | ENSORLP00000036208 | ENSORLP00000002541 | Ventral anterior homeobox 2. | Cytochrome P450, family 26, subfamily C, polypeptide 1; Belongs to the cytochrome P450 family. | 0.502 |
vax2 | LOC101171064 | ENSORLP00000036208 | ENSORLP00000038952 | Ventral anterior homeobox 2. | Growth differentiation factor 6a. | 0.400 |
vax2 | LOC101175353 | ENSORLP00000036208 | ENSORLP00000010004 | Ventral anterior homeobox 2. | SIX homeobox 7. | 0.517 |
vax2 | atp6v1ba | ENSORLP00000036208 | ENSORLP00000034915 | Ventral anterior homeobox 2. | Vacuolar proton pump subunit B; Non-catalytic subunit of the peripheral V1 complex of vacuolar ATPase; Belongs to the ATPase alpha/beta chains family. | 0.543 |
vax2 | pax2 | ENSORLP00000036208 | ENSORLP00000038259 | Ventral anterior homeobox 2. | Paired box 2b. | 0.403 |