STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRICKLE1Prickle homolog 1a. (844 aa)    
Predicted Functional Partners:
VANGL2
Vang-like protein.
    
 0.988
VANGL1
VANGL planar cell polarity protein 1.
    
 0.984
dvl2
Dishevelled segment polarity protein 2.
    
 0.975
dvl1
Dishevelled segment polarity protein 1a.
    
 0.964
dvl3
Dishevelled segment polarity protein 3a.
    
 0.963
LOC101170632
Vang-like protein.
    
 0.962
daam1
Dishevelled associated activator of morphogenesis 1b.
    
 0.696
invs
Inversin.
   
 0.690
celsr1
Cadherin EGF LAG seven-pass G-type receptor 1a; Belongs to the G-protein coupled receptor 2 family.
   
 0.680
fzd6
Frizzled class receptor 6; Belongs to the G-protein coupled receptor Fz/Smo family.
  
 
 0.614
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.