STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSORLP00000036342Stereocilin. (1613 aa)    
Predicted Functional Partners:
LOC101164350
Protocadherin-related 15b.
    
 0.548
LOC101158428
Immunoglobulin-like domain containing receptor 1a.
    
 0.546
LOC101175444
Immunoglobulin-like domain containing receptor 1b.
    
 0.546
ripor2
RHO family interacting cell polarization regulator 2.
    
 0.539
prps1
Phosphoribosyl pyrophosphate synthetase 1B.
      
 0.499
tmem132e
Transmembrane protein 132E.
      
 0.499
trrap
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 
 0.490
Ush2a
Uncharacterized protein.
    
 0.488
ENSORLP00000044012
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.482
clrn2
Clarin 2.
     
 0.478
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.