STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
igbp1Immunoglobulin (CD79A) binding protein 1. (356 aa)    
Predicted Functional Partners:
ppp2ca
Serine/threonine-protein phosphatase.
    
 0.990
ppp2cb
Serine/threonine-protein phosphatase.
    
 0.990
mlst8
MTOR associated protein, LST8 homolog (S. cerevisiae).
    
 0.967
rptor
Regulatory associated protein of MTOR, complex 1.
    
 0.964
Mtor
Serine/threonine-protein kinase TOR.
   
 0.956
ppp4c
Serine/threonine-protein phosphatase.
    
 
 0.955
LOC101171716
Serine/threonine-protein phosphatase.
   
 
 0.929
PPP6C
Serine/threonine-protein phosphatase.
   
 
 0.929
akt1s1
Uncharacterized protein.
     
 0.912
deptor
DEP domain containing MTOR-interacting protein.
   
  0.901
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.