STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101160113Microtubule-associated protein. (536 aa)    
Predicted Functional Partners:
LOC101159747
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
  0.911
LOC101162905
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
  0.911
cdk5
Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily.
    
 
 0.717
ywhag
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
    
 
 0.612
stub1
STIP1 homology and U-Box containing protein 1.
    
 
 0.598
LOC101161673
Apolipoprotein Eb.
    
 
 0.587
snca
Uncharacterized protein; Belongs to the synuclein family.
   
 
 0.585
serpina10
Si:ch1073-416d2.3; Belongs to the serpin family.
      
 0.566
LOC101174720
Serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10a; Belongs to the serpin family.
      
 0.566
LOC101157288
Microtubule-associated protein 1Ab.
   
 
 0.550
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.