clip1 protein (Oryzias latipes) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

clip1

CAP-GLY domain containing linker protein 1a. (2225 aa)

Predicted Functional Partners:

Mtor

0.920

ENSORLP00000033841

0.900

CLASP1

0.868

trim36

0.813

LOC101162870

0.759

LOC101166919

0.759

bub3

0.630

nudc

0.620

mapre1

0.610

mapre2

0.573

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CLASP1	LOC101162870	ENSORLP00000001619	ENSORLP00000031330	Uncharacterized protein.	Dynactin 1a.	0.849
CLASP1	LOC101166919	ENSORLP00000001619	ENSORLP00000037337	Uncharacterized protein.	Dynactin 1b.	0.849
CLASP1	bub3	ENSORLP00000001619	ENSORLP00000011991	Uncharacterized protein.	BUB3 mitotic checkpoint protein.	0.676
CLASP1	clip1	ENSORLP00000001619	ENSORLP00000036679	Uncharacterized protein.	CAP-GLY domain containing linker protein 1a.	0.868
CLASP1	mapre1	ENSORLP00000001619	ENSORLP00000025086	Uncharacterized protein.	Microtubule-associated protein, RP/EB family, member 1b.	0.616
CLASP1	mapre2	ENSORLP00000001619	ENSORLP00000021810	Uncharacterized protein.	Microtubule-associated protein, RP/EB family, member 2.	0.435
CLASP1	nudc	ENSORLP00000001619	ENSORLP00000034777	Uncharacterized protein.	NudC nuclear distribution protein.	0.724
CLASP1	trim36	ENSORLP00000001619	ENSORLP00000026794	Uncharacterized protein.	Tripartite motif containing 36.	0.826
ENSORLP00000033841	LOC101162870	ENSORLP00000033841	ENSORLP00000031330	Uncharacterized protein.	Dynactin 1a.	0.627
ENSORLP00000033841	LOC101166919	ENSORLP00000033841	ENSORLP00000037337	Uncharacterized protein.	Dynactin 1b.	0.627
ENSORLP00000033841	Mtor	ENSORLP00000033841	ENSORLP00000000608	Uncharacterized protein.	Serine/threonine-protein kinase TOR.	0.920
ENSORLP00000033841	bub3	ENSORLP00000033841	ENSORLP00000011991	Uncharacterized protein.	BUB3 mitotic checkpoint protein.	0.630
ENSORLP00000033841	clip1	ENSORLP00000033841	ENSORLP00000036679	Uncharacterized protein.	CAP-GLY domain containing linker protein 1a.	0.900
ENSORLP00000033841	mapre1	ENSORLP00000033841	ENSORLP00000025086	Uncharacterized protein.	Microtubule-associated protein, RP/EB family, member 1b.	0.610
ENSORLP00000033841	mapre2	ENSORLP00000033841	ENSORLP00000021810	Uncharacterized protein.	Microtubule-associated protein, RP/EB family, member 2.	0.573
ENSORLP00000033841	nudc	ENSORLP00000033841	ENSORLP00000034777	Uncharacterized protein.	NudC nuclear distribution protein.	0.620
LOC101162870	CLASP1	ENSORLP00000031330	ENSORLP00000001619	Dynactin 1a.	Uncharacterized protein.	0.849
LOC101162870	ENSORLP00000033841	ENSORLP00000031330	ENSORLP00000033841	Dynactin 1a.	Uncharacterized protein.	0.627
LOC101162870	clip1	ENSORLP00000031330	ENSORLP00000036679	Dynactin 1a.	CAP-GLY domain containing linker protein 1a.	0.759
LOC101162870	mapre1	ENSORLP00000031330	ENSORLP00000025086	Dynactin 1a.	Microtubule-associated protein, RP/EB family, member 1b.	0.893