STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
qser1Glutamine and serine rich 1. (1638 aa)    
Predicted Functional Partners:
Nufip2
Nuclear FMR1 interacting protein 2.
   
  
 0.599
IWS1
Interacts with SUPT6H, CTD assembly factor 1.
      
 0.559
cstf3
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
      
 0.558
dstyk
Protein kinase domain-containing protein.
      
 0.558
topaz1
Asp_Glu_race_2 domain-containing protein.
      
 0.558
b4gat1
Beta-1,4-glucuronyltransferase 1.
   
  
 0.491
cwc25
CWC25 spliceosome associated protein homolog.
      
 0.477
tmtc3
Transmembrane O-mannosyltransferase targeting cadherins 3.
   
 
 0.458
LOC101154996
Transmembrane O-mannosyltransferase targeting cadherins 2a.
   
 
 0.450
prrg4
Proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane).
 
    
 0.438
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.