STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSORLP00000036829Uncharacterized protein. (596 aa)    
Predicted Functional Partners:
H2L673_ORYLA
Uncharacterized protein.
  
     0.535
ENSORLP00000038043
Uncharacterized protein.
  
     0.534
c1qtnf7
C1q and TNF related 7.
  
     0.531
ENSORLP00000030516
annotation not available
  
     0.531
c1qtnf2
C1q and TNF related 2.
  
     0.528
scara3
Scavenger receptor class A, member 3.
  
     0.520
ENSORLP00000039365
Collagen IV NC1 domain-containing protein.
  
     0.516
ENSORLP00000026505
LAM_G_DOMAIN domain-containing protein.
 
     0.514
LOC101157725
Collectin subfamily member 10.
  
     0.502
LOC101159689
EMI domain-containing protein.
  
     0.497
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.