STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sipa1l2Signal-induced proliferation-associated 1 like 2. (1726 aa)    
Predicted Functional Partners:
wdr27
Uncharacterized protein.
 
  
 
 0.838
GNG4
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
      
 0.836
smoc2
SPARC related modular calcium binding 2.
      
 0.835
LOC101167529
RAP1A, member of RAS oncogene family b.
    
 0.507
LOC101172864
Uncharacterized protein.
    
 0.507
LOC101171247
RAP1A, member of RAS oncogene family a.
    
 0.507
RAP2B
RAP2B, member of RAS oncogene family.
    
 0.477
rap2c
RAP2C, member of RAS oncogene family.
    
 0.477
RAP2A
Uncharacterized protein.
    
 0.477
LOC101171042
DIRAS family, GTP-binding RAS-like 1b.
    
 0.464
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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