STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MSRB1-2Methionine sulfoxide reductase B1. (92 aa)    
Predicted Functional Partners:
txn
Thioredoxin; Belongs to the thioredoxin family.
   
 0.630
LOC101170553
NME/NM23 family member 8; Belongs to the NDK family.
  
 0.626
LOC101163534
Si:ch1073-358c10.1.
  
 
 0.616
LOC101174315
Methionine sulfoxide reductase A.
  
 
 0.616
cat
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.
   
  
 0.562
mrpl20
Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
   
 
 0.562
clpx
Caseinolytic mitochondrial matrix peptidase chaperone subunit b.
  
 
 0.478
txnrd2
Thioredoxin reductase 2, tandem duplicate 1.
  
  
 0.462
ENSORLP00000039626
Frataxin.
    
 
 0.460
sdhc
Succinate dehydrogenase complex, subunit C, integral membrane protein.
   
  
 0.449
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.