STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101161869Fibrinogen C-terminal domain-containing protein. (240 aa)    
Predicted Functional Partners:
sigirr
Single immunoglobulin and toll-interleukin 1 receptor (TIR) domain.
   
 0.608
ism1
Isthmin 1.
   
  
 0.518
mpl
MPL proto-oncogene, thrombopoietin receptor.
      
 0.518
Adamtsl1
Uncharacterized protein.
      
 0.511
adamts13
ADAM metallopeptidase with thrombospondin type 1 motif, 13.
   
  
 0.510
tsr1
TSR1 ribosome maturation factor.
      
 0.508
dpy19l3
Dpy-19 like C-mannosyltransferase 3.
      
 0.508
dpy19l1
Dpy-19-like 1, like (H. sapiens).
      
 0.508
adamts16
ADAM metallopeptidase with thrombospondin type 1 motif, 16.
      
 0.503
unc5a
Unc-5 netrin receptor A.
      
 0.502
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.