STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
c2cd5C2 calcium dependent domain containing 5. (1158 aa)    
Predicted Functional Partners:
fibp
Fibroblast growth factor (acidic) intracellular binding protein a.
    
 
 0.739
cdk5
Cyclin-dependent kinase 5; Belongs to the protein kinase superfamily.
    
 
 0.728
LOC105358811
MADS-box domain-containing protein.
      
 0.678
LOC101171982
Tr-type G domain-containing protein.
      
 0.675
EEF2
Eukaryotic translation elongation factor 2b.
      
 0.576
supt7l
SPT7 like, STAGA complex gamma subunit.
      
 0.559
pitx2
Homeobox protein.
      
 0.547
srf
Serum response factor b.
      
 0.546
ENSORLP00000027329
Spermatogenesis associated 6.
      
 0.449
baz2a
Bromodomain adjacent to zinc finger domain, 2A.
   
  
 0.449
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.