STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCF24BHLH domain-containing protein. (173 aa)    
Predicted Functional Partners:
LOC100820722
Transcription factor 3b.
   
 0.461
LOC101161725
BHLH domain-containing protein.
   
 0.461
tcf12
Transcription factor 12.
   
 0.461
TCF4
Transcription factor 4.
   
 0.461
tcf3
E2A2 transcription factor.
   
 0.461
mad2l1bp
MAD2L1 binding protein.
   
  
 0.447
LOC101162780
LIM domain binding 1a.
    
 0.425
ldb2
LIM domain binding 2a.
    
 0.425
LOC101158085
LIM-domain binding 1b.
    
 0.425
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.