STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSORLP00000037903Uncharacterized protein. (239 aa)    
Predicted Functional Partners:
fau
40S ribosomal protein S30.
   
   0.820
rps12
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
    
 
 0.726
rpl23a
Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
    
 
 0.662
rps13
Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
    
   0.657
rps15
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
    
   0.657
rps2
Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
   0.657
rps19
Ribosomal protein S19.
    
   0.657
rsrc1
Uncharacterized protein.
    
 
 0.645
dock4
Dedicator of cytokinesis 4b; Belongs to the DOCK family.
    
 
 0.624
RPL7A
Ribosomal protein L7a.
    
 
 0.617
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (12%) [HD]