STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptpn23Protein tyrosine phosphatase, non-receptor type 23, a. (1885 aa)    
Predicted Functional Partners:
stam2
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2.
   
 0.921
stam
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.
   
 0.897
LOC101165394
GRB2 related adaptor protein 2a.
   
 0.887
tm9sf1
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
   
 0.887
LOC101156446
Charged multivesicular body protein 4C.
   
 0.887
LOC101173541
Uncharacterized protein.
   
 0.887
chmp4b
Charged multivesicular body protein 4Bb.
   
 0.887
grb2
Growth factor receptor-bound protein 2b.
   
 0.814
hgs
Hepatocyte growth factor-regulated tyrosine kinase substrate.
   
 0.798
LOC101166194
GRB2 related adaptor protein b.
   
 0.795
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.