STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eif2ak3Protein kinase domain-containing protein. (1094 aa)    
Predicted Functional Partners:
hspa5
Uncharacterized protein; Belongs to the heat shock protein 70 family.
   
 0.954
atf4-2
BZIP domain-containing protein.
     
 0.952
nfe2l2
Nuclear factor, erythroid 2-like 2a.
   
 0.937
xbp1
X-box binding protein 1.
   
  
 0.836
eif2s2
Eukaryotic translation initiation factor 2, subunit 2 beta.
   
 
 0.744
eif2s3
Eukaryotic translation initiation factor 2, subunit 3 gamma.
   
 
 0.737
atf6
BZIP domain-containing protein.
    
 
 0.685
atf4
BZIP domain-containing protein.
     
 0.607
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
   
 
 0.601
eefsec
Eukaryotic elongation factor, selenocysteine-tRNA-specific.
   
 
 0.578
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.