STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zglp1GATA-type domain-containing protein. (555 aa)    
Predicted Functional Partners:
nfyb
Nuclear transcription factor Y, beta a.
    
 
 0.621
mos
V-mos Moloney murine sarcoma viral oncogene homolog; Belongs to the protein kinase superfamily.
   
 
 0.565
smc1b
Structural maintenance of chromosomes protein.
   
 0.564
ddx31
RNA helicase.
     
 0.534
nfyc
Nuclear transcription factor Y, gamma.
   
 
 0.525
chrac1
Chromatin accessibility complex subunit 1.
   
 
 0.525
tbp
Uncharacterized protein.
   
 0.502
tbpl2
TATA box binding protein like 2.
   
 0.502
LOC101174576
Uncharacterized protein.
   
 0.502
adcy9
CREB binding protein b.
    
 0.500
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.