STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSORLP00000038311Uncharacterized protein. (748 aa)    
Predicted Functional Partners:
ILK
Integrin linked kinase.
   
 0.716
LOC101172012
Uncharacterized protein.
   
 0.716
LOC101155756
LIM domain-containing protein.
   
 0.628
LOC101164852
LIM domain-containing protein.
   
 0.628
rsu1
Ras suppressor protein 1.
    
 0.525
pop5
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.
    
 0.500
rpp30
Ribonuclease P/MRP 30 subunit.
    
 0.467
pop4
Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.
    
 0.464
LOC101156802
Rho guanine nucleotide exchange factor (GEF) 7b.
   
 0.458
LOC101166510
Rho guanine nucleotide exchange factor (GEF) 7a.
   
 0.458
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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