STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSORLP00000038418Uncharacterized protein. (204 aa)    
Predicted Functional Partners:
H2LR81_ORYLA
Uncharacterized protein.
 
      0.899
LOC101157472
ARVCF delta catenin family member a.
 
 
    0.710
ctnna1
Catenin (cadherin-associated protein), alpha 1.
   
 0.693
ctnna2
Catenin (cadherin-associated protein), alpha 2.
   
 0.693
LOC101161503
Uncharacterized protein.
   
 0.693
ctnnb1
Catenin (cadherin-associated protein), beta 1.
   
 0.686
LOC101173369
Junction plakoglobin a.
   
 0.650
LOC101174288
Cadherin 5; Cadherins are calcium-dependent cell adhesion proteins.
    
 0.637
LOC101171502
Uncharacterized protein.
   
 0.623
ARVCF
ARVCF delta catenin family member b.
 
    
 0.612
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.