STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ehbp1EH domain binding protein 1. (1264 aa)    
Predicted Functional Partners:
pdlim3
PDZ and LIM domain 3a.
   
 0.649
pdlim2
PDZ and LIM domain 2 (mystique).
   
 0.649
pdlim1
PDZ and LIM domain 1 (elfin).
   
 0.649
pdlim4
PDZ and LIM domain 4.
   
 0.649
LOC101174195
PDZ and LIM domain 5a.
   
 0.649
pdlim7
PDZ and LIM domain 7.
   
 0.649
LOC101158216
PDZ and LIM domain 5b.
   
 0.649
ENSORLP00000044829
Calponin-homology (CH) domain-containing protein.
   
0.602
LOC101172563
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
  0.588
cask
Uncharacterized protein; Belongs to the MAGUK family.
   
  0.588
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.