STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STRNWD_REPEATS_REGION domain-containing protein. (772 aa)    
Predicted Functional Partners:
strip1
Striatin interacting protein 1.
    
 
 0.757
LOC101159479
Striatin interacting protein 2.
    
 
 0.749
LOC101167061
Protein phosphatase 2, regulatory subunit A, beta b.
   
 
 0.727
LOC110014886
MOB family member 4, phocein.
   
 
 0.720
fgfr1op2
FGFR1 oncogene partner 2.
    
 
 0.715
ccm2
CCM2 scaffold protein.
     
 0.713
pdcd10
Programmed cell death 10b.
    
 
 0.683
cttnbp2nl
CTTNBP2 N-terminal like a.
   
 
 0.678
LOC101161055
CTTNBP2 N-terminal like b.
   
 
 0.678
ccm2l
CCM2 like scaffold protein.
     
 0.677
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.