tardbp protein (Oryzias latipes) - STRING interaction network

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Predicted Interactions

gene neighborhood

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textmining

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[Homology]

Score

tardbp

TAR DNA binding protein, like. (299 aa)

Predicted Functional Partners:

LOC101167445

0.901

gsc

0.832

u2af2

0.817

LOC101169703

0.788

ube2i

0.788

ewsr1

0.785

H2M705_ORYLA

0.762

LOC101162697

0.755

LOC101171767

0.755

kctd2

0.731

Your Current Organism:

Oryzias latipes

NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H2M705_ORYLA	LOC101162697	ENSORLP00000014255	ENSORLP00000005758	TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Serine and arginine rich splicing factor 1a.	0.632
H2M705_ORYLA	LOC101167445	ENSORLP00000014255	ENSORLP00000004481	TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAR DNA binding protein.	0.762
H2M705_ORYLA	LOC101171767	ENSORLP00000014255	ENSORLP00000006698	TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Uncharacterized protein.	0.632
H2M705_ORYLA	ewsr1	ENSORLP00000014255	ENSORLP00000008429	TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	EWS RNA-binding protein 1b.	0.635
H2M705_ORYLA	tardbp	ENSORLP00000014255	ENSORLP00000038752	TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAR DNA binding protein, like.	0.762
LOC101162697	H2M705_ORYLA	ENSORLP00000005758	ENSORLP00000014255	Serine and arginine rich splicing factor 1a.	TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.632
LOC101162697	LOC101167445	ENSORLP00000005758	ENSORLP00000004481	Serine and arginine rich splicing factor 1a.	TAR DNA binding protein.	0.755
LOC101162697	ewsr1	ENSORLP00000005758	ENSORLP00000008429	Serine and arginine rich splicing factor 1a.	EWS RNA-binding protein 1b.	0.591
LOC101162697	tardbp	ENSORLP00000005758	ENSORLP00000038752	Serine and arginine rich splicing factor 1a.	TAR DNA binding protein, like.	0.755
LOC101162697	u2af2	ENSORLP00000005758	ENSORLP00000014464	Serine and arginine rich splicing factor 1a.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.912
LOC101167445	H2M705_ORYLA	ENSORLP00000004481	ENSORLP00000014255	TAR DNA binding protein.	TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.762
LOC101167445	LOC101162697	ENSORLP00000004481	ENSORLP00000005758	TAR DNA binding protein.	Serine and arginine rich splicing factor 1a.	0.755
LOC101167445	LOC101169703	ENSORLP00000004481	ENSORLP00000016945	TAR DNA binding protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.788
LOC101167445	LOC101171767	ENSORLP00000004481	ENSORLP00000006698	TAR DNA binding protein.	Uncharacterized protein.	0.755
LOC101167445	ewsr1	ENSORLP00000004481	ENSORLP00000008429	TAR DNA binding protein.	EWS RNA-binding protein 1b.	0.785
LOC101167445	gsc	ENSORLP00000004481	ENSORLP00000038851	TAR DNA binding protein.	Goosecoid.	0.832
LOC101167445	kctd2	ENSORLP00000004481	ENSORLP00000027547	TAR DNA binding protein.	Potassium channel tetramerization domain containing 2.	0.731
LOC101167445	tardbp	ENSORLP00000004481	ENSORLP00000038752	TAR DNA binding protein.	TAR DNA binding protein, like.	0.901
LOC101167445	u2af2	ENSORLP00000004481	ENSORLP00000014464	TAR DNA binding protein.	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.	0.817
LOC101167445	ube2i	ENSORLP00000004481	ENSORLP00000045538	TAR DNA binding protein.	Ubiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family.	0.788