STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSORLP00000038758Gastrin-releasing peptide receptor. (261 aa)    
Predicted Functional Partners:
LOC101157195
Neurotensin.
    
 0.736
prok1
Prokineticin 1.
     
 0.649
prok2
Prokineticin 2.
     
 0.590
LOC101173159
Motilin receptor; Belongs to the G-protein coupled receptor 1 family.
     
 0.550
trhr
Thyrotropin-releasing hormone receptor 1a; Belongs to the G-protein coupled receptor 1 family.
     
 0.546
agt
Angiotensinogen; Belongs to the serpin family.
    
 0.534
edn1
Endothelin 1.
    
 0.508
nmb
Uncharacterized protein.
    
 0.501
sec11a
Signal peptidase complex catalytic subunit SEC11.
     
 0.494
Grp
Uncharacterized protein.
     
 0.494
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.