STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
P2RY6Pyrimidinergic receptor P2Y6. (379 aa)    
Predicted Functional Partners:
tbrg1
Transforming growth factor beta regulator 1.
      
 0.720
tsku
Tsukushi small leucine rich proteoglycan homolog (Xenopus laevis).
      
 0.681
hspa13
Heat shock protein 70 family, member 13.
   
  
 0.607
ARHGEF17
Rho guanine nucleotide exchange factor (GEF) 17.
      
 0.606
p2rx4
P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel.
   
  
 0.562
p2rx2
P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel.
      
 0.558
LOC101173001
P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel.
      
 0.558
p2ry2
Purinergic receptor P2Y2, tandem duplicate 1; Belongs to the G-protein coupled receptor 1 family.
   
 
0.527
cpeb3
Cytoplasmic polyadenylation element binding protein 3.
      
 0.481
CPEB4
Cytoplasmic polyadenylation element binding protein 4.
      
 0.481
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.