STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rfxankRegulatory factor X-associated ankyrin-containing protein. (197 aa)    
Predicted Functional Partners:
rfxap
Regulatory factor X-associated protein.
    
 
 0.962
rfx5
Regulatory factor X, 5.
   
 
 0.954
RFX7
Regulatory factor X7.
    
 
 0.899
ENSORLP00000042692
Class II, major histocompatibility complex, transactivator.
   
 
 0.873
rab6b
Uncharacterized protein.
    
 0.689
LOC101156359
RAB6B, member RAS oncogene family.
    
 0.689
mrpl55
Uncharacterized protein.
      
 0.639
scly
Selenocysteine lyase.
   
 
 0.625
LOC101161970
Regulatory factor X7b.
   
 
 0.602
cilp2
Cartilage intermediate layer protein 2.
      
 0.591
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.