STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101159014Protein tyrosine phosphatase non-receptor type 22. (786 aa)    
Predicted Functional Partners:
LOC101158271
Tyrosine-protein kinase.
   
 0.705
matk
Tyrosine-protein kinase.
   
 0.705
CSK
Tyrosine-protein kinase.
   
 0.705
LOC101156493
Proline-serine-threonine phosphatase interacting protein 1a.
   
 
 0.638
LOC101174493
Proline-serine-threonine phosphatase interacting protein 1b.
   
 
 0.638
SHC3
SHC adaptor protein 3.
   
 0.625
shc1
SHC (Src homology 2 domain containing) transforming protein 1.
   
 0.625
SHC4
SHC adaptor protein 4.
   
 0.625
LOC101175223
Uncharacterized protein.
   
 0.545
LOC101174230
Receptor protein-tyrosine kinase.
    
 0.538
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.