STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101163219Si:dkey-71h2.2. (335 aa)    
Predicted Functional Partners:
dab2
DAB adaptor protein 2.
     
  0.818
LOC101161779
Low density lipoprotein receptor b.
    
  0.737
LOC101166361
Uncharacterized protein.
    
  0.737
ENSORLP00000039203
Uncharacterized protein.
    
  0.737
ENSORLP00000045548
Uncharacterized protein.
    
  0.737
appl2
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
    
 
 0.661
appl1
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.
    
 
 0.661
H2M6E4_ORYLA
Uncharacterized protein.
    
  0.659
LOC101165932
Intersectin 2a.
    
  0.659
ENSORLP00000034742
Uncharacterized protein.
    
  0.659
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.