STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101167667Cryptochrome circadian regulator 1a. (624 aa)    
Predicted Functional Partners:
PER2
Period circadian regulator 2.
   
 0.828
LOC101161338
Period circadian clock 2.
   
 0.828
LOC101159817
Period circadian clock 3.
   
 0.824
ARNTL2
Aryl hydrocarbon receptor nuclear translocator like 2.
   
 0.788
LOC101174183
Aryl hydrocarbon receptor nuclear translocator-like 2.
   
 0.788
LOC101159313
Aryl hydrocarbon receptor nuclear translocator-like 1a.
   
 0.758
timeless
Timeless circadian clock.
    
 0.738
LOC101172430
Neuronal PAS domain protein 2.
   
 0.736
per1
Period homolog 1.
   
 0.721
LOC101165450
Clock circadian regulator b.
   
 0.703
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.