STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSORLP00000039326RING-type domain-containing protein. (292 aa)    
Predicted Functional Partners:
parp9
Poly [ADP-ribose] polymerase.
   
 0.843
fam162a
Family with sequence similarity 162 member A.
   
 0.843
LOC101170686
Poly [ADP-ribose] polymerase.
 
 
 0.811
LOC101170439
Poly [ADP-ribose] polymerase.
 
 
 0.811
notch1
Notch receptor 1b.
    
 0.707
LOC101171596
Notch receptor 1a.
    
 0.707
LOC101162450
Notch receptor 3.
    
 0.698
LOC101175033
Poly [ADP-ribose] polymerase.
 
 
 0.696
H2LGV0_ORYLA
ANK_REP_REGION domain-containing protein.
    
  0.668
ifih1
Interferon induced with helicase C domain 1.
   
 0.617
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.