STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cramp1Cramped chromatin regulator homolog 1. (1161 aa)    
Predicted Functional Partners:
nr0b2
Nuclear receptor subfamily 0, group B, member 2a.
    
 
 0.571
mtrex
Uncharacterized protein.
   
  
 0.561
crym
Crystallin, mu.
      
 0.560
jpt2
Uncharacterized protein.
      
 0.558
LOC101166817
Nuclear protein, ataxia-telangiectasia locus.
    
 
 0.515
antkmt
Family with sequence similarity 173 member A.
      
 0.491
setbp1
SET binding protein 1.
  
 
 0.480
LOC101157295
Short chain dehydrogenase/reductase family 42E, member 2; Belongs to the 3-beta-HSD family.
      
 0.480
ENSORLP00000034311
Uncharacterized protein.
   
 
 0.477
LOC101164986
Si:dkey-27c15.3.
   
 
 0.477
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.