STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101175028Uncharacterized protein. (192 aa)    
Predicted Functional Partners:
LOC101169609
BAI1-associated protein 2a.
   
 0.979
BAIAP2
BAI1 associated protein 2.
   
 0.978
LOC101169438
Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.
   
 0.975
dock1
Dedicator of cytokinesis 1; Belongs to the DOCK family.
   
 0.970
nckap1
NCK-associated protein 1.
   
 0.962
LOC101159814
NCK associated protein 1 like.
   
 0.962
VAV1
Vav guanine nucleotide exchange factor 1.
   
 0.961
vav2
Vav 2 guanine nucleotide exchange factor.
   
 0.961
VAV3
Vav guanine nucleotide exchange factor 3.
   
 0.961
iqgap2
IQ motif containing GTPase activating protein 2.
   
 0.960
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.