STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101163534Si:ch1073-358c10.1. (234 aa)    
Predicted Functional Partners:
LOC101170553
NME/NM23 family member 8; Belongs to the NDK family.
  
 0.926
txn
Thioredoxin; Belongs to the thioredoxin family.
  
 0.922
txn2
Thioredoxin 2.
   
 0.841
Msrb3
Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues.
 
 
 0.793
msrb2
Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues.
 
 
 0.790
dnajc10
DnaJ (Hsp40) homolog, subfamily C, member 10.
   
 0.755
glrx2
Glutaredoxin 2.
  
 
 0.708
LOC101162407
Zgc:152951.
  
 
 0.708
glrx
Glutaredoxin (thioltransferase).
  
 
 0.708
cth
Cystathionase (cystathionine gamma-lyase), like.
  
 
 0.653
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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