STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSORLP00000040078Uncharacterized protein. (139 aa)    
Predicted Functional Partners:
APBB1IP
Uncharacterized protein.
 
      0.650
LOC101165394
GRB2 related adaptor protein 2a.
    
 0.530
LOC101166194
GRB2 related adaptor protein b.
    
 0.530
LOC101160815
GRB2 related adaptor protein a.
    
 0.530
grb2
Growth factor receptor-bound protein 2b.
    
 0.530
tln2
Talin 2b.
    
 0.524
LOC101173776
Talin 2a.
    
 0.524
tln1
Talin 1.
    
 0.524
LOC101175393
Macrophage stimulating 1 receptor a.
    
 0.475
met
MET proto-oncogene, receptor tyrosine kinase.
    
 0.475
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.