STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trim59Tripartite motif containing 59. (444 aa)    
Predicted Functional Partners:
ecsit
ECSIT signalling integrator.
   
 
 0.773
ift80
Intraflagellar transport 80 homolog (Chlamydomonas).
 
  
 0.666
trim32
Tripartite motif containing 32.
    
 0.596
ift74
Intraflagellar transport 74.
   
  0.554
IFT122
Intraflagellar transport 122.
    
  0.548
cluap1
Clusterin associated protein 1.
    
  0.542
wdr19
WD repeat domain 19.
     
  0.540
ift57
Intraflagellar transport 57 homolog (Chlamydomonas).
     
  0.540
ift20
Intraflagellar transport 20 homolog (Chlamydomonas).
     
  0.540
ift172
Intraflagellar transport 172.
     
  0.540
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.