STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101174278Low density lipoprotein receptor adaptor protein 1a. (294 aa)    
Predicted Functional Partners:
dab2
DAB adaptor protein 2.
     
 0.880
LOC101161779
Low density lipoprotein receptor b.
    
  0.784
LOC101166361
Uncharacterized protein.
    
  0.784
ENSORLP00000039203
Uncharacterized protein.
    
  0.784
ENSORLP00000045548
Uncharacterized protein.
    
  0.784
LOC101171688
AP complex subunit beta.
    
  0.732
ap1b1
AP complex subunit beta.
    
  0.732
ap4b1
AP complex subunit beta; Belongs to the adaptor complexes large subunit family.
    
  0.674
appl2
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
    
 
 0.661
appl1
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.
    
 
 0.661
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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