STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101166954PPM-type phosphatase domain-containing protein. (1675 aa)    
Predicted Functional Partners:
sugt1
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone.
    
 
 0.733
cap1
Adenylyl cyclase-associated protein; Belongs to the CAP family.
    
 
 0.726
cap2
Adenylyl cyclase-associated protein; Belongs to the CAP family.
    
 
 0.726
LOC101174244
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.589
LOC101174851
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.589
LOC101155451
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.589
akt1
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.589
LOC101162468
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.589
nppc
C-type natriuretic peptide 4; Exhibits natriuretic and vasodepressant activity. Has cGMP- stimulating activity. May help to regulate body fluid homeostasis in a variety of aquatic environments.
    
 0.570
usp1
Ubiquitin carboxyl-terminal hydrolase.
    
 
 0.516
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.