STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101167618Uncharacterized protein. (193 aa)    
Predicted Functional Partners:
LOC101172697
Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
   
 0.972
rock1
Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity.
   
 0.972
arhgef2
Rho/rac guanine nucleotide exchange factor (GEF) 2.
   
 0.970
arhgap35
Uncharacterized protein.
    
 0.965
LOC101169478
Rho GTPase activating protein 35b.
    
 0.965
arhgap5
Rho GTPase activating protein 5.
    
 0.965
arhgef1
Rho guanine nucleotide exchange factor (GEF) 1b.
   
 0.963
arhgef12
Rho guanine nucleotide exchange factor (GEF) 12a.
   
 0.963
diaph2
Diaphanous-related formin 2.
   
 0.962
DIAPH1
Diaphanous related formin 1.
   
 0.962
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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