STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pet100PET100 cytochrome c oxidase chaperone. (78 aa)    
Predicted Functional Partners:
NDUFB1
NADH:ubiquinone oxidoreductase subunit B1.
   
  
 0.829
ndufb4
NADH:ubiquinone oxidoreductase subunit B4.
   
  
 0.726
LOC101170379
Cytochrome c oxidase copper chaperone COX17.
   
  
 0.703
PET117
PET117 cytochrome c oxidase chaperone.
   
  
 0.691
suox
Sulfite oxidase.
      
 0.663
Pcp2
Uncharacterized protein.
      
 0.560
LOC101165997
Cytochrome c oxidase assembly homolog 15 (yeast).
      
 0.559
LOC101161443
Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.
      
 0.559
efcc1
EF-hand and coiled-coil domain containing 1.
      
 0.558
LOC101166537
Cytochrome c oxidase assembly factor COX18.
      
 0.558
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.