STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dmgdhDimethylglycine dehydrogenase. (917 aa)    
Predicted Functional Partners:
LOC101175580
Betaine-homocysteine methyltransferase; Involved in the regulation of homocysteine metabolism.
 
 
 0.986
LOC101157623
Hcy-binding domain-containing protein; Involved in the regulation of homocysteine metabolism.
 
 
 0.974
pipox
Pipecolic acid oxidase.
  
 0.970
gnmt
Glycine N-methyltransferase.
   
 
 0.942
sardh
Sarcosine dehydrogenase.
  
 
0.927
LOC101155190
Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.
  
 0.926
LOC101156637
Glycine cleavage system protein H (aminomethyl carrier), b.
  
 0.926
gldc
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
  
 0.921
gart
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
  
  
 0.791
mthfd2
Uncharacterized protein.
  
 
 0.761
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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