STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ypelaProtein yippee-like 3; May be involved in proliferation and apoptosis in myeloid precursor cells; Belongs to the yippee family. (125 aa)    
Predicted Functional Partners:
sez6l2
Seizure related 6 homolog (mouse)-like 2.
   
  
 0.728
LOC101174920
Potassium channel tetramerization domain containing 13.
      
 0.716
LOC101170433
Coronin; Belongs to the WD repeat coronin family.
    
 
 0.703
kif22
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.690
rmnd5b
Required for meiotic nuclear division 5 homolog B.
    
 
 0.660
ppp4c
Serine/threonine-protein phosphatase.
      
 0.644
LOC101155246
WD repeat domain 26b.
   
 
 0.592
LOC101164206
Uncharacterized protein.
   
 
 0.592
ENSORLP00000031025
Proline-rich transmembrane protein 2.
      
 0.589
ENSORLP00000034485
Glycerophosphodiester phosphodiesterase domain containing 3a.
 
 
  
 0.589
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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