STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSORLP00000041354ER membrane protein complex subunit 9. (91 aa)    
Predicted Functional Partners:
Emc9
ER membrane protein complex subunit 9.
 
   
  0.952
emc2
ER membrane protein complex subunit 2.
   
 0.944
emc4
ER membrane protein complex subunit 4; Belongs to the EMC4 family.
   
 0.914
emc1
ER membrane protein complex subunit 1.
    
 0.911
emc7
ER membrane protein complex subunit 7.
    
 0.878
emc6
ER membrane protein complex subunit 6.
   
 0.875
emc10
ER membrane protein complex subunit 10.
    
 0.866
LOC101173295
ER membrane protein complex subunit 3; Belongs to the EMC3 family.
    
 0.864
mmgt1
Membrane magnesium transporter 1.
    
 0.860
LOC101162909
ER membrane protein complex subunit 3; Belongs to the EMC3 family.
    
 0.856
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.