STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101162001G_PROTEIN_RECEP_F1_2 domain-containing protein. (376 aa)    
Predicted Functional Partners:
LOC101172085
G_PROTEIN_RECEP_F1_2 domain-containing protein.
  
  
 
0.902
ptgs2
EGF-like domain-containing protein.
      
 0.678
star
Steroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone.
      
 0.678
prok2
Prokineticin 2.
     
 0.651
gnrh3
GnRH-associated peptide 3; Stimulates the secretion of gonadotropins. Belongs to the GnRH family.
      
 0.590
LOC101159115
Uncharacterized protein.
      
 0.558
gnrh1
GnRH-associated peptide 1; Stimulates the secretion of gonadotropins. Belongs to the GnRH family.
     
 0.541
edn1
Endothelin 1.
    
 0.522
tac3
Tachykinin 3.
     
 0.513
kiss-2
12-RF amide peptide.
      
 0.492
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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