STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101167815Down syndrome cell adhesion molecule b. (2069 aa)    
Predicted Functional Partners:
tenm1
Teneurin transmembrane protein 1.
   
 
 0.564
tenm2
Teneurin transmembrane protein 2.
   
 
 0.560
ptprg
Carbonic anhydrase XVI b.
    
 0.556
ptprn2
Protein tyrosine phosphatase receptor type N2.
   
 0.556
grin2c
Glutamate receptor, ionotropic, N-methyl D-aspartate 2Ca.
   
 
 0.534
kcnd1
Potassium voltage-gated channel, Shal-related subfamily, member 1; Belongs to the potassium channel family.
   
 
 0.528
kcnd2
Potassium voltage-gated channel, Shal-related subfamily, member 2; Belongs to the potassium channel family.
   
 
 0.524
CDH8
Cadherin 8; Cadherins are calcium-dependent cell adhesion proteins.
   
 0.521
nck2
Cytoplasmic protein.
    
 0.521
LOC101164509
Netrin 5.
   
 0.515
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.