STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101170709Tyrosine-protein kinase. (680 aa)    
Predicted Functional Partners:
LOC101165394
GRB2 related adaptor protein 2a.
   
0.615
grb2
Growth factor receptor-bound protein 2b.
   
0.603
LOC101162065
B cell linker.
   
 0.596
LOC101175393
Macrophage stimulating 1 receptor a.
   
 
0.577
met
MET proto-oncogene, receptor tyrosine kinase.
   
 
0.577
mst1r
Macrophage stimulating 1 receptor b.
   
 
0.577
LOC101175223
Uncharacterized protein.
   
 0.561
LOC101155857
RUN and FYVE domain containing 1.
    
  0.557
lcp2
Lymphocyte cytosolic protein 2a.
   
 0.553
LOC101170171
Zeta chain of T cell receptor associated protein kinase 70.
   
0.547
Your Current Organism:
Oryzias latipes
NCBI taxonomy Id: 8090
Other names: Japanese medaka, Japanese rice fish, O. latipes, Poecilia latipes, medaka
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.